On my of Empire character I just kind of buzzed through the story then went straight into the expansions. I never did feel like I got the full experience of the story line correct. So I started a republic trooper and decided to make a fresh start. My question is what missions do I follow in order to get the full feel of the story besides the expansion story line. I've never run ops they kind of intimidate me a bit lol and the nathema and traitor stuff confuses me I'm not sure which order to play them. I want all of my choices to carry over and influence my toon correctly. If anyone can tell me what to do after the main game content I would greatly appreciate it.

For the vanilla game and even later expansions there's this guide. The only thing that guide is missing is Nathema Conspiracy and the upcoming 5.10-Jedi Under Siege patch.